一、 product introduction

Golden e ye ^® The DNA identification system 27 Y uses five-color fluorescent labeling technology to amplify 27 Y-STR loci including 20 core Y-STR loci at one time.

二、 Reagent storage

1.        After receiving the kits frozen in dry ice or gel ice packs, if they are not used temporarily, please store them below -20°C;

2.        After the kit is taken out for use, the pre-reaction component 4 ×PCR reaction master mix VII is stored at -20°C, and the remaining pre-reaction reagents are stored at 4°C to avoid repeated freezing and thawing. If the single dosage is small, it is recommended to store at -20°C after aliquoting ;

3.        Store the components after the reaction at 4°C, avoid repeated freezing and thawing, and do not touch the reagents before the reaction to avoid contamination.

三、 PCR amplification

1.        amount of DNA template

of DNA typing standard 9948 in this kit is 2ng/ μl . Users can properly adjust the amount of template added in the PCR system and the number of cycles in the PCR program according to their own DNA template concentration. If the amount of template is too low, some alleles may be missing, and if the amount of template is too high, it may lead to results beyond the detection range of the genetic analyzer.

2.        Shaking and mixing of reagents

In order to obtain the best amplification effect, it is recommended to use the previous 4 × PCR reaction master mix VII component and 5 × 27 Y primer mixture to vortex for 10 seconds and then centrifuge at low speed to rule out the uneven concentration of the solution caused by possible tube wall adsorption .

3.   Amplification system preparation

it Table1： Standard (extraction-free) amplification system preparation composition

4.        Protocol settings

Table2： PCR amplification procedure

NOTE: Use an ABI 9700 (Gold Block) cycler and perform amplification in MAX mode.

四、 spectral correction

1.        Make sure that the POP4 gel and Buffer of the sequencer are within the validity period ;

2.        Mix the 5-color Matrix spectral calibration reagent and deionized formamide according to the following ratio , vortex and mix well, and dispense into a 96-well plate , 10 μl per well;

3.        After denaturation at 95°C for 3 minutes , quickly cool at 0°C for 3 minutes;

4.        Spectral Calibration Recommended Parameters

4.1.    3130 series: ①Create a Run Module: Name it GoldeneyeG5Matrix, select SPECTRAL for Type, and Spect36_POP4 for Template ; in Run Module Settings: fill in 3 for Injection_Voltage , fill in 10 for Injection_Time , fill in 1500 for Run_Time , and fill in other parameters according to default values. ②Create Protocol: Name as Golden Eye yeG5, select G5 for Dye Set, and select Golden Eye yeG5Matrix for Run Module ; in Edit Parameter, fill in 2.0 for Lower of Matrix Condition Number Bounds, and fill in 20 for Upper.

4.2.    3500 series: Create Dye Set : Dye Set Name is named GoldenEye G5, Chemistry selects Matrix Standard, Dye Set Template selects G5 Template ; in the Parameters option, Matrix Condition Number Upper Limit is set to 8.0 (adjustable according to the actual situation), and After Scan is set Subtract 200 from the Scan point value of the first fragment peak of the matrix, add 200 to the Scan point value of the largest fragment peak of the matrix in Before Scan, and fill in other parameters with default values.

5.        In order to obtain the best correction effect, it is recommended to set the Sensitivity to 0.4, the Minimum Quality Score to 0.95 , and at the same time ensure that the spectral correction peak height is between 750rfu-4000rfu (3 130 series) or 3000rfu-20000rfu ( 3 500 series) . If this standard cannot be reached, it can be adjusted according to the actual electrophoresis situation.

五、 Electrophoresis detection

1.        Configure the sample loading system according to the ratio of molecular weight internal standard : deionized formamide = 0.5μl : 9.5μl , and distribute 10μl/well ;

2.        Amount of PCR product used: 1 μl , amount of allele ladder used: 1 μl ;

3.        After denaturation at 95°C for 3 minutes , quickly cool at 0°C for 3 minutes;

4.        Electrophoresis detection: The recommended injection voltage of 3130 series is 3k Volts, and the injection time is 10 sec; the injection voltage of 3500 series is 1.2k Volts, and the injection time is 24 sec.

六、 data analysis

1.        Open the Genemapper ID software , import the panels and bin files , and establish Analysis Method and Size Standard (T500: 65, 70, 80, 100, 120, 140, 160, 180, 200, 225, 250, 275, 300, 330, 360, 390, 420, 450, 490, 500);

2.        Import the electrophoresis data, select the corresponding analysis parameters such as Panel , Analysis Method and Size Standard to analyze the data.

atteched file 1： Kit components (100 servings )

attached file 2： Kit locus information

attached file 1： Allelic Ladder Typing Map

attached file 2： DNA typing standard 9948 typing map

Notice:

1.         This kit is valid for one year, see the product packaging for the production date and batch number

2.         Can be used for family identification, forensic research, scientific research, etc.

3.         The trial pack is for 25 people, and the attached table is the composition list for 100 people, and the trial pack comes with spectral correction